GenomeTools
Posted: 2014-09-17 Filed under: academic, drawing, slackbuilds | Tags: gene, genome, genometools, graphics, gt, inkscape, ugene, unipro Leave a commentI need to export gene coordinates and exon organisation as a figure. I have prepared the annotations in UniPro Ugene, which I have installed from SBo. A nice tool for graphical representation of such data is provided by the GenomeTools software. It can be easily installed from SBo, too. Read the rest of this entry »
Clearing syslog
Posted: 2014-08-26 Filed under: misc, system | Tags: clear, syslog, var Leave a commentDue to some reason, my /var/log/syslog had grown over 500MB. Since I have /var mounted to a separate partition I noticed it easily. I had never had such an issue, so I googled around and found this very old post. Read the rest of this entry »
Amino acid sequence as a column
Posted: 2014-08-19 Filed under: academic | Tags: amino acid, embassy, emboss, protein, sequence Leave a commentI need to present an amino acid sequence as a column, so I can paste it in a spreadsheet document (to serve as a reference to other analyses). There is a relatively straightforward way to do this. Read the rest of this entry »
Sound in Skype 4.3
Posted: 2014-08-16 Filed under: desktop, media, network, slackbuilds, system | Tags: 32bit, alsa, compat32, multilib, pulseaudio, skype, slackware, x86_64 2 CommentsSince version 4.3, Skype for Linux requires PulseAudio. It is available from SBo, but since Skype is a 32bit program only, the necessary 32bit compatibility packages should be installed as well. I am running Slackware64 14.1 -multilib system and I have a virtual machine with Slackware 32. Read the rest of this entry »
Slackalaxy 