Tag Archives: phylogeny

Archaeopteryx configuration 2

Couple of years ago, I wrote about the configuration file of Archaeopteryx, a phylogenetic tree analysis program. I have set it to use native ui, as described in my old post. However, some things have changed meanwhile, so in order … Continue reading

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Cleaning up with sed

I needed to clean up some plain text files from data and characters I did not want. To be more precise, I have a phylogenetic tree, obtained from the TimeTree web-site. Species presented there are mainly birds, several reptiles and … Continue reading

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Archaeopteryx configuration

Archaeopteryx is a software tool for the visualization, analysis, and editing of potentially large and highly annotated phylogenetic trees. It is available at SBo and is particularly useful if you want to create visually appealing phylogenetic trees, to be used … Continue reading

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